CDS

Accession Number TCMCG051C19651
gbkey CDS
Protein Id XP_006381137.2
Location join(5282116..5282628,5283510..5283692,5283803..5283895,5284157..5284309,5284609..5284700,5285130..5285271,5285357..5285464,5286000..5286085,5286850..5286921,5287025..5287151,5287254..5287340,5287572..5287664,5288230..5288388,5288783..5288866,5288954..5289034,5289128..5289210,5289307..5289424,5289918..5290181)
Gene LOC7485483
GeneID 7485483
Organism Populus trichocarpa

Protein

Length 845aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_006381075.2
Definition isoamylase 1, chloroplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category G
Description Isoamylase
KEGG_TC -
KEGG_Module M00565        [VIEW IN KEGG]
KEGG_Reaction R09995        [VIEW IN KEGG]
R11261        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01214        [VIEW IN KEGG]
EC 3.2.1.68        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004133        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005977        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006112        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010021        [VIEW IN EMBL-EBI]
GO:0010368        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0019156        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043033        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:2000896        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTTGAGATCAGATATATGACATTCTGTGTCCCCATCAAACAAACACACACCGCTTACCATCACCAAAATGTACCACTTCTTGCCACTCATGATCATGTACCAGTAATTAGCAGCAACAGCTCTCTATCCCCCCTCAAACTACAAAACATGAACTTAGTTCACTCTCCTTCACACTCACTACAACTCCCCAAATTCATTTCCCATTTCCAAAATACCCCAAAATTCTATCCTCCAAAAAGAGTTACCACTTCCAATTTAGAAACAATTGGCAGTAACATTTTTAGTAATTCAACAGCATTGATTCCCATTAAAGCAGCAAGTGAAGGAGTGGATACAGCTGTAGTAGTGGTGGAGGAGGAGGAGCCTAAATTGAAAAAAATTCAGGTGTTTGAAGGCCATCCTGCACCATTTGGTGCAACAGTTCGTGATGGTGGTGTCAATTTTGCTATATTTTCTGCCGACGCAGTTTCTGCTACTCTTTGCTTGATTTCACTCTCTGATTTGCCTGAGAATAGAGTGACTGAGCAGATTTTTCTTGATCCTTTGACCAACAAGACTGGAGATGTTTGGCATGTGCTTTTGAAAGGAGATTTTAAAGATATGCTATATGGGTACAAGTTTGATGGGAACTTTTCTCCTGAAGTAGGACTTTACTATGATCCTTCTAAGATCGTATTGGATCCTTATGCAAAATCAGTTATTAGCAGAGGGGAGTTTGGTGTTTTGGGGCATGATGATAATCGATGGCCTCAAATGGCCTGCATGATACCCACTGCAGAAAACAAGTTTGATTGGGAGGGAGATTCACCATTAAAGCATCCACAAAGAGATCTAATAATATATGAAATGCATGTTCGAGGGTTTACACAGCATGAATCAAGCAGGACTGAATTCCCTGGTACATACCTTGGTGTAGTGGAGAAGCTTGATCATTTGAAGGAACTTGGTGTCAACTGCATAGAGTTAATGCCATGCCATGAATTCAATGAGCTTGAGTACTACAGTTACAATTCTGTCTTGGGTGACTACAAGGTTAATTTTTGGGGATATTCTACCGTCAATTACTTTTCGCCTATGACAAGATACTCATCTGCTGGCACAAGGAACTGTGGCCGAGATGCAATTAATGAATTCAAGCTTCTTGTTAGAGAAGCACATAAACGAGGAATTGAGGTGTTCATGGACGTTGTTTTCAATCACACAGCGGAAGGAAATGAGAAAGGTCCCATTCTGTCTTTCAGAGGAGTTGATAACAGTATCTATTACATGCTTGCTCCTAAGGGAGAGTTCTATAATTATTCAGGTTGTGGCAACACATTCAATTGCAACCATCCTATCGTGCGTCAATTTATATTGGACTGCTTAAGATATTGGGTGACAGAGATGCACGTAGATGGCTTCCGCTTTGACCTTGCTTCTATTATGACTAGAAGTAGTAGTCTCTGGGATGCAGTTAATGTATTCGGGAGTCCCATAGAAGGTGACTTGCTGACAACTGGCACTCCTCTCAGCAGCCCTCCATTGATTGACATGATGAGTAATGATCCCATACTCCGTGATGTTAAGCTTATAGCTGAAGCATGGGATGCGGGAGGATTGTATCAAGTTGGGATGTTTCCCCATTGGCGTATTTGGTCAGAATGGAATGGGAAGTATCGAGACATTGTGCGGCAGTTCATTAAGGGGACAGATGGTTTTTCTGGGGCTTTTGCTGAATGCCTCTGTGGGAGCCCGAATTTATACCAGGAAGGAGGAAGGAAACCATGGAACAGCATCAACTTTGTATGTGCACATGATGGTTTTACTTTGGCTGATTTAGTGACATATAACAAGAAGCATAACTTGGCAAATGGCGAAGACAACAATGATGGAGAAAATCATAACAATAGCTGGAATTGTGGACAGGAGGGTGAATTTGCCAGCATTTCAGTGAAGAAATTGCGAAAACGACAAATGAGAAATTTCTTCCTGTGTCTCATGGTTTCACAAGGTGTTCCAATGATATACATGGGTGATGAATATGGTCACACAAAAGGGGGAAACAACAATACATATTGCCATGATAACTATATTAACTACTTCCGCTGGGATAAGAAGGAAGAATCCTCATCAGACTTCTTTAGATTTTGCCGCCTCGTGACCAAGTTCCGCCATGAATGTGAGTCCCTTGGCTTGAATGACTTCCCAAAAGCAGAGAGGCTGCAATGGCATGGTCATGATCCTGGAACACCAGATTGGTCAGAAACAAGCCGTTTTGTGGCCTTTACACTGATTGACTCGGTGAAGGGCGAGATCTACATCGCCTTCAATGCTAGCCATTTGGCAGTTACCATTACACTGCCAGAACGGCCAGGATACAGATGGGAGCCCCTGGTAGACTCTGGCAAGCCTGCACCGTTTGATTTCCTTTCTAGTGACATCCCAGAAAGAGACCTCGCAATTAAACAGTATTCTCACTTCCTTGAGGCCAATCTATACCCTATGCTTAGTTATACTTCCATCATCCTCGTACTCTCTCCCAACGACAATGCTTAA
Protein:  
MFEIRYMTFCVPIKQTHTAYHHQNVPLLATHDHVPVISSNSSLSPLKLQNMNLVHSPSHSLQLPKFISHFQNTPKFYPPKRVTTSNLETIGSNIFSNSTALIPIKAASEGVDTAVVVVEEEEPKLKKIQVFEGHPAPFGATVRDGGVNFAIFSADAVSATLCLISLSDLPENRVTEQIFLDPLTNKTGDVWHVLLKGDFKDMLYGYKFDGNFSPEVGLYYDPSKIVLDPYAKSVISRGEFGVLGHDDNRWPQMACMIPTAENKFDWEGDSPLKHPQRDLIIYEMHVRGFTQHESSRTEFPGTYLGVVEKLDHLKELGVNCIELMPCHEFNELEYYSYNSVLGDYKVNFWGYSTVNYFSPMTRYSSAGTRNCGRDAINEFKLLVREAHKRGIEVFMDVVFNHTAEGNEKGPILSFRGVDNSIYYMLAPKGEFYNYSGCGNTFNCNHPIVRQFILDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDAVNVFGSPIEGDLLTTGTPLSSPPLIDMMSNDPILRDVKLIAEAWDAGGLYQVGMFPHWRIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPNLYQEGGRKPWNSINFVCAHDGFTLADLVTYNKKHNLANGEDNNDGENHNNSWNCGQEGEFASISVKKLRKRQMRNFFLCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEESSSDFFRFCRLVTKFRHECESLGLNDFPKAERLQWHGHDPGTPDWSETSRFVAFTLIDSVKGEIYIAFNASHLAVTITLPERPGYRWEPLVDSGKPAPFDFLSSDIPERDLAIKQYSHFLEANLYPMLSYTSIILVLSPNDNA